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Plowright RK, K Manlove, TE Besser, D Paez, KR Andrews, PE Matthews, L Waits, PJ Hudson, EF Cassirer. 2017. Age-structured variation in infectious period explains epidemiological features of pneumonia in bighorn sheep.  Ecology Letters.

Catchen J, PA Hohenlohe, L Bernatchez, WC Funk, KR Andrews, F Allendorf. 2017. Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations. Molecular Ecology Resources. 17(3):362-5.

Hohenlohe PA, LY Rutledge, LP Waits, KR Andrews, JR Adams, JW Hinton, RM Nowak, BR Patterson, AP Wydeven, PA Wilson, BN White. 2017. Whole-genome data do not support recent hybrid origins of red wolves and eastern wolves. Science Advances. 9(6):e1602250, DOI:10.1126/sciadv.1602250 

BW Bowen, MR Gaither, JD DiBattista, M Iacchei, KR Andrews, WS Grant, RJ Toonen, JC Briggs. 2017. Comparative Phylogeography of the Ocean Planet. Pp. 5-21 In: Avise JC, Bowen BW, Ayala FJ. (eds) In the light of evolution, Volume X: Comparative phylogeography, National Academies Press, Washington D.C.

KM Cammen, KR Andrews, EL Carroll, AD Foote, E Humble, JI Khudyakov, M Louis, MR McGowen, MT Olsen, AM VanCise. 2016. Genomic methods take the plunge: recent advances in high-throughput sequencing of marine mammals. Journal of Heredity 107(6):481-95, doi:10.1093/jhered/esw044 (Invited Review)

BW Bowen, MR Gaither, JD DiBattista, M Iacchei, KR Andrews, WS Grant, RJ Toonen, JC Briggs. 2016. Comparative Phylogeography of the Ocean Planet. Proceedings of the National Academy of Sciences 113(29):7962–9, doi: 10.1073/pnas.1602404113

Andrews KR, AJ Williams, I Fernandez-Silva, SJ Newman, JM Copus, CB Wakefield, JE Randall, BW Bowen. 2016. Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic. Molecular Phylogenetics and Evolution

K Selkoe, O Gaggiotti, E Treml, J Wren, M Donovan, Hawaii Reef Connectivity Consortium, R Toonen. 2016. The DNA of coral reef biodiversity – predicting and protecting genetic diversity of reef assemblages. Proceedings of the Royal Society B  (283):20160354

Andrews KR, JM Good, MR Miller, G Luikart, PA Hohenlohe. 2016. Harnessing the power of RADseq for ecological and evolutionary genomics.      Nature Reviews Genetics 17(81-92)

Goetze E, KR Andrews, KTCA Peijnenburg, E Portner, E Norton. 2015. Population persistence in the plankton. PLoS ONE 10(8):e0136087.doi:10.1371/journal.pone.0136087

Andrews KR, PA Hohenlohe, MR Miller, B Hand, JE Seeb, G Luikart. 2014. Trade-offs and utility of alternative RADseq methods: Reply to Puritz et al. 2014. Molecular Ecology 23:5943-5946.

Andrews KR, E Norton, I Fernandez-Silva, E Portner, E Goetze. 2014. Multilocus evidence for globally-distributed cryptic species and distinct populations across ocean gyres in a mesopelagic copepod. Molecular Ecology 23(22):5462-79.

Andrews KR, G Luikart. 2014. Recent novel approaches for population genomics data analysis. Molecular Ecology 23:1661-1667.

Andrews KR, V Moriwake, C Wilcox, EG Grau, C Kelley, RL Pyle, BW Bowen. 2014. Phylogeographic analyses of submesophotic snappers Etelis coruscans and Etelis “marshi” (Family Lutjanidae) reveal concordant genetic structure across the Hawaiian Archipelago. PLoS ONE 9(4)e91665

Selkoe AS, OE Gaggiotti, KR Andrews, MA Bernal, C Bird, H Bolick, I Baums, R Coleman, GT Concepcion, MT Craig, JD DiBattista, J Eble, I Fernandez-Silva, MR Gaither, M Iacchei, NR Polato, MAJ Rivera LA Rocha, D Skillings, M Timmers, Z Szabo, BW Bowen, RJ Toonen. 2014. Emergent patterns of population genetic structure for a coral reef community. Molecular Ecology 23:3064-3079.

Andrews KR, WF Perrin, M Oremusk, L Karczmarski, BW Bowen, JB Puritz, RJ Toonen. 2013. The evolving male: spinner dolphin (Stenella longirostris) ecotypes are divergent at Y chromosome but not mtDNA or autosomal markers. Molecular Ecology 22(9):2408-23.

Andrews K 2013. Population Genetics in the Conservation of Primates and Cetaceans. In: L. Karczmarski & J. Yamagiwa (eds.) Primates and Cetaceans: Field Studies and Conservation of Complex Mammalian Societies, pp 289-308, Springer Japan.

Toonen RJ, JB Puritz, ZH Forsman, JL Whitney, I Fernandez-Silva, KR Andrews, CE Bird. 2013. ezRAD: A simplified method for genomic genotyping in non-model organisms. PeerJ. 1:e203; DOI 10.7717/peerj.203

Fernandez-Silva I, J Whitney, B Wainwright, KR Andrews, H Ylitalo-Ward, BW Bowen, RJ Toonen, E Goetze, SA Karl. 2013. Microsatellites for next-generation ecologists: a post-sequencing bioinformatics pipeline. PLoS ONE 8(2): e55990.doi:10.1371/journal.pone.0055990

Toonen RJ, KR Andrews, IB Baums, CE Bird, GT Concepcion, TS Daly-Engel, JA Eble, A Faucci, MR Gaither, M Iacchei, JB Puritz, JK Schultz, DJ Skillings, M Timmers, BW Bowen. 2011. Defining boundaries for ecosystem-based management: A multispecies case study of marine connectivity across the Hawaiian Archipelago. Journal of Marine Biology 2011, Article ID 460173

MAJ Rivera*, Andrews KR*, D Kobayashi, J Wren, C Kelley, GK Roderick, RJ Toonen. 2011. Genetic analyses and simulations of larval dispersal reveal distinct populations and directional connectivity across the range of the Hawaiian Grouper (Epinephelus quernus). Journal of Marine Biology 2011: Article ID 765353. *Equal contribution

Timmers MA, RJ Toonen, KR Andrews, C Bird, MJ deMaintenon, RE Brainard. 2011. Widespread dispersal of the crown-of-thorns sea star, Acanthaster planci, across the Hawaiian Archipelago and Johnston Atoll. Journal of Marine Biology 2011: Article ID 934269.

Andrews KR, L Karczmarski, WWL Au, SH Rickards, CA Vanderlip, BW Bowen, E Gordon Grau, RJ Toonen. 2010. Rolling stones and stable homes: Social structure, habitat diversity, and population genetics of the Hawaiian spinner dolphin (Stenella longirostris). Molecular Ecology 19:732-748.

Johnston DW, J Robbins, ME Chapla, D K Mattila, KR Andrews. 2008. Diversity, habitat associations and stock structure of odontocete cetaceans in the waters of American Samoa, 2003-06. Journal of Cetacean Research and Management 10:59-66.

Andrews KR, L Karczmarski, WWL Au, SH Rickards, CA Vanderlip, RJ Toonen. 2006. Patterns of genetic diversity of the Hawaiian spinner dolphin (Stenella longirostris). Atoll Research Bulletin No. 543:65-73.

Au WWL, AA Pack, MO Lammers, LM Herman, MH Deakos, K Andrews. 2006. Acoustic properties of humpback whale songs. Journal of the Acoustical Society of America 120:1103-1110.

Nachtigall PE, WWL Au, JL Pawloski, K Andrews, and CW Oliver. 2000. Measurements of the low frequency components of active and passive sounds produced by dolphins. Aquatic Mammals 26:167-174.